BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018B07SP1|AL427266
(1132 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1593 1199 0.0
>3x_Contig1593
Length = 10902
Score = 1199 bits (573), Expect = 0.0
Identities = 578/582 (99%)
Strand = Plus / Minus
Query: 1 gtctcgatcccaactccgagttgttattgatcaattcatgcagctgtgtcgataaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gtctcgatcccaactccgagttgttattgatcaattcatgcagctgtgtcgataaatctg 812
Query: 61 atcccggtttcccaaactgagcaactgcgtttgctgtgtcctgttgtcgatcgttcggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atcccggtttcccaaactgagcaactgcgtttgctgtgtcctgttgtcgatcgttcggta 752
Query: 121 ccgataccgaaactttcctggtctttccatcagctttggacactgtataattttgagaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ccgataccgaaactttcctggtctttccatcagctttggacactgtataattttgagaaa 692
Query: 181 cagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggctcagtcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 cagaacctgtagcctggccagaattcgtctcgtcagaagttgtgactggctcagtcacat 632
Query: 241 caactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgttctttcaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 caactcctgactcagcttcagtctgggcctcggtctgggcttgaacttgttctttcaatc 572
Query: 301 ctcgtagcaattcattaagtttagtagtagacggcgaggtcatattttcagtgggcatac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctcgtagcaattcattaagtttagtagtagacggcgaggtcatattttcagtgggcatac 512
Query: 361 ttaaccttccgtctccagtggttcctttcatttgctccaagccagttgtagccatcctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ttaaccttccgtctccagtggttcctttcatttgctccaagccagttgtagccatcctca 452
Query: 421 aaactccccttttaataacactatgagaaactattaagcaatgactccccaaggtccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaactccccttttaataacactatgagaaactattaagcaatgactccccaaggtccaaa 392
Query: 481 aagtatatgtccaacgattaaacgttcacaaaacgaaaccagttatagccagcacttgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aagtatatgtccaacgattaaacgttcacaaaacgaaaccagttatagccagcacttgct 332
Query: 541 gatccggacgggtataaagtatatatatatatrtrkatatat 582
||||||||||||||||||| |||||||||||| | ||||||
Sbjct: 331 gatccggacgggtataaagnatatatatatatatatatatat 290
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.45 0.722 1.37
Gapped
Lambda K H
1.45 0.722 1.37
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 62,851
Number of Sequences: 1807
Number of extensions: 62851
Number of successful extensions: 21068
Number of sequences better than 1.0e-20: 1
length of query: 1132
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1116
effective length of database: 10,329,639
effective search space: 11527877124
effective search space used: 11527877124
T: 0
A: 40
X1: 5 (10.5 bits)
X2: 14 (29.3 bits)
S1: 11 (23.5 bits)
S2: 48 (100.9 bits)